BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H08LP1|AL429300
(295 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 325 2e-89
>3x_Contig1619
Length = 7770
Score = 325 bits (157), Expect = 2e-89
Identities = 158/159 (99%)
Strand = Plus / Plus
Query: 1 actggtgtataccgggtaggagaccgcgggggaaaaaagatattatattataatattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 actggtgtataccgggtaggagaccgcgggggaaaaaagatattatattataatattgat 3057
Query: 61 aatcataataatctcataaatttataccagccctcatatgttatatgagggctggtatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 aatcataataatctcataaatttataccagccctcatatgttatatgagggctggtatat 3117
Query: 121 ataaataattatatattctatttttatataatadttatt 159
||||||||||||||||||||||||||||||||| |||||
Sbjct: 3118 ataaataattatatattctatttttatataataattatt 3156
Score = 230 bits (111), Expect = 1e-60
Identities = 114/117 (97%)
Strand = Plus / Plus
Query: 178 tatatacaataatatatattaawdmccccgcaaccatgctatggtcgcggggataattat 237
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3175 tatatacaataatatatattaatgaccccgcaaccatgctatggtcgcggggataattat 3234
Query: 238 aaatattcatctaaaaatataatatatataatgtaatttataaaataatataaataa 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3235 aaatattcatctaaaaatataatatatataatgtaatttataaaataatataaataa 3291
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.716 1.35
Gapped
Lambda K H
1.44 0.716 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3736
Number of Sequences: 1807
Number of extensions: 3736
Number of successful extensions: 447
Number of sequences better than 1.0e-20: 1
length of query: 295
length of database: 10,358,551
effective HSP length: 15
effective length of query: 280
effective length of database: 10,331,446
effective search space: 2892804880
effective search space used: 2892804880
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 47 (97.9 bits)